Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine utilization repressor | SHEWBE_RS02040 | Not Available | - | 423173 - 423874 | 26345.6 |
| imidazolonepropionase | SHEWBE_RS02045 | Not Available | + | 424069 - 425295 | 43879.9 |
| dna-methyltransferase | SHEWBE_RS02055 | Not Available | - | 426149 - 426823 | 25491.8 |
| duf134 domain-containing protein | SHEWBE_RS02060 | Not Available | + | 427176 - 427478 | 10864.2 |
| outer membrane beta-barrel protein | SHEWBE_RS02065 | Not Available | - | 427941 - 428381 | 15592.2 |
| ftsx-like permease family protein | SHEWBE_RS02070 | Not Available | - | 428576 - 430954 | 87660.6 |
| abc transporter atp-binding protein | SHEWBE_RS02075 | Not Available | - | 430944 - 431651 | 25453.5 |
| efflux rnd transporter periplasmic adaptor subunit | SHEWBE_RS02080 | Not Available | - | 431644 - 432918 | 47097.9 |
| hypothetical protein | SHEWBE_RS02085 | Not Available | + | 433393 - 433767 | 14474.4 |
| hypothetical protein | SHEWBE_RS20245 | Not Available | - | 433943 - 434107 | 6053.06 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
