Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| immune inhibitor a domain-containing protein | SHEWBE_RS01985 | Not Available | - | 409277 - 412204 | 104902.0 |
| hypothetical protein | SHEWBE_RS01990 | Not Available | - | 412292 - 412486 | 7084.4 |
| metal transporter | SHEWBE_RS01995 | Not Available | + | 412817 - 414361 | 56137.7 |
| nrde family protein | SHEWBE_RS02000 | Not Available | + | 414827 - 415588 | 28576.7 |
| yybh family protein | SHEWBE_RS02005 | Not Available | - | 415638 - 416060 | 15970.0 |
| lyse family translocator | SHEWBE_RS02015 | Not Available | + | 416367 - 416993 | 22518.1 |
| mechanosensitive ion channel family protein | SHEWBE_RS02020 | Not Available | - | 417262 - 418521 | 47178.0 |
| duf3157 family protein | SHEWBE_RS02025 | Not Available | + | 418874 - 419527 | 23974.7 |
| histidine ammonia-lyase | SHEWBE_RS02030 | Not Available | - | 419723 - 421255 | 53945.0 |
| urocanate hydratase | SHEWBE_RS02035 | Not Available | - | 421258 - 422958 | 61484.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
