Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding protein | SHEWBE_RS01935 | Not Available | - | 397916 - 399589 | 60840.6 |
| duf3306 domain-containing protein | SHEWBE_RS01940 | Not Available | - | 399798 - 400430 | 23016.1 |
| duf3305 domain-containing protein | SHEWBE_RS01945 | Not Available | - | 400427 - 400900 | 17948.2 |
| formate dehydrogenase accessory sulfurtransferase fdhd | SHEWBE_RS01950 | Not Available | + | 401214 - 402059 | 30971.5 |
| helix-turn-helix transcriptional regulator | SHEWBE_RS01955 | Not Available | + | 402132 - 403037 | 33982.9 |
| hypothetical protein | SHEWBE_RS01960 | Not Available | - | 403561 - 404268 | 26839.9 |
| phospholipase d family protein | SHEWBE_RS01965 | Not Available | + | 404996 - 406528 | 57830.8 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | SHEWBE_RS01970 | Not Available | - | 406799 - 407887 | 39728.4 |
| flagellar basal body-associated protein flil | SHEWBE_RS01975 | Not Available | - | 408113 - 408547 | 16577.2 |
| chorismate--pyruvate lyase family protein | SHEWBE_RS01980 | Not Available | + | 408648 - 409211 | 21447.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
