Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coproporphyrinogen iii oxidase family protein | SHEWBE_RS01885 | Not Available | - | 384953 - 386290 | 50891.5 |
| formate dehydrogenase subunit gamma | SHEWBE_RS01890 | Not Available | - | 386634 - 387620 | 36593.3 |
| formate dehydrogenase fdh3 subunit beta | SHEWBE_RS01895 | Not Available | - | 387823 - 388392 | 20528.7 |
| molybdopterin-dependent oxidoreductase | SHEWBE_RS01900 | Not Available | - | 388411 - 391266 | 106079.0 |
| formate dehydrogenase | SHEWBE_RS01905 | Not Available | - | 391284 - 391481 | 6878.06 |
| formate dehydrogenase subunit gamma | SHEWBE_RS01910 | Not Available | - | 392140 - 393180 | 37745.6 |
| formate dehydrogenase fdh3 subunit beta | SHEWBE_RS01915 | Not Available | - | 393286 - 393876 | 21207.2 |
| formate dehydrogenase subunit alpha | SHEWBE_RS01920 | Not Available | - | 393903 - 396752 | 106342.0 |
| twin-arginine translocation signal domain-containing protein | SHEWBE_RS01925 | Not Available | - | 396815 - 397015 | 6866.14 |
| molecular chaperone | SHEWBE_RS01930 | Not Available | - | 397219 - 397905 | 25450.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
