Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin synthase catalytic subunit moae | SHEWBE_RS01825 | Not Available | - | 374251 - 374718 | 17005.1 |
| molybdopterin synthase sulfur carrier subunit | SHEWBE_RS01830 | Not Available | - | 374720 - 374971 | 8962.64 |
| cyclic pyranopterin monophosphate synthase moac | SHEWBE_RS01835 | Not Available | - | 375001 - 375477 | 17218.0 |
| gtp 3',8-cyclase moaa | SHEWBE_RS01840 | Not Available | - | 375605 - 376585 | 36852.0 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | SHEWBE_RS01845 | Not Available | + | 376931 - 378580 | 60498.9 |
| methyl-accepting chemotaxis protein | SHEWBE_RS01850 | Not Available | + | 378873 - 380771 | 69055.0 |
| tyrosine-type recombinase/integrase | SHEWBE_RS01860 | Not Available | - | 381021 - 381481 | 15925.0 |
| pfkb family carbohydrate kinase | SHEWBE_RS01865 | Not Available | - | 382044 - 382880 | 29928.6 |
| gnat family n-acetyltransferase | SHEWBE_RS01875 | Not Available | - | 383390 - 383950 | 21481.6 |
| hypothetical protein | SHEWBE_RS01880 | Not Available | + | 384639 - 384824 | 7334.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
