Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | SHEWBE_RS01685 | Not Available | + | 344726 - 344887 | 5889.01 |
| type i toxin-antitoxin system antitoxin yafn | SHEWBE_RS01690 | Not Available | + | 345049 - 345342 | 10719.9 |
| type ii toxin-antitoxin system yafo family toxin | SHEWBE_RS01695 | Not Available | + | 345339 - 345734 | 15102.0 |
| m14 family metallopeptidase | SHEWBE_RS01700 | Not Available | + | 346143 - 347990 | 69550.9 |
| hypothetical protein | SHEWBE_RS01705 | Not Available | - | 348100 - 348399 | 11406.1 |
| tonb-dependent receptor | SHEWBE_RS01710 | Not Available | - | 348396 - 348998 | 22703.5 |
| tonb-dependent receptor plug domain-containing protein | SHEWBE_RS01715 | Not Available | - | 349012 - 349764 | 26708.3 |
| phosphatase pap2 family protein | SHEWBE_RS01720 | Not Available | - | 350008 - 350820 | 29588.0 |
| giy-yig nuclease family protein | SHEWBE_RS01725 | Not Available | - | 351054 - 351320 | 9944.27 |
| s9 family peptidase | SHEWBE_RS01730 | Not Available | - | 351413 - 353545 | 80882.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
