Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system minor pseudopilin gspi | SHEWBE_RS01630 | Not Available | - | 332806 - 333213 | 15109.4 |
| type ii secretion system minor pseudopilin gsph | SHEWBE_RS01635 | Not Available | - | 333191 - 333787 | 22124.4 |
| type ii secretion system major pseudopilin gspg | SHEWBE_RS01640 | Not Available | - | 333905 - 334339 | 16141.2 |
| type ii secretion system inner membrane protein gspf | SHEWBE_RS01645 | Not Available | - | 334447 - 335670 | 44651.4 |
| type ii secretion system atpase gspe | SHEWBE_RS01650 | Not Available | - | 335744 - 337315 | 58342.1 |
| type ii secretion system secretin gspd | SHEWBE_RS01655 | Not Available | - | 337308 - 339443 | 77680.9 |
| type ii secretion system protein gspc | SHEWBE_RS01660 | Not Available | - | 339544 - 340452 | 33441.5 |
| ribosome-associated heat shock protein hsp15 | SHEWBE_RS01665 | Not Available | + | 340742 - 341140 | 15348.6 |
| hsp33 family molecular chaperone hslo | SHEWBE_RS01670 | Not Available | + | 341250 - 342113 | 31746.5 |
| phosphoenolpyruvate carboxykinase | SHEWBE_RS01675 | Not Available | + | 342640 - 344181 | 56043.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
