Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co2+/mg2+ efflux protein apag | SHEWBE_RS18470 | Not Available | + | 4057839 - 4058219 | 14043.5 |
| symmetrical bis(5'-nucleosyl)-tetraphosphatase | SHEWBE_RS18475 | Not Available | + | 4058239 - 4059063 | 30572.7 |
| methyl-accepting chemotaxis protein | SHEWBE_RS18480 | Not Available | + | 4059199 - 4061226 | 73341.3 |
| duf3718 domain-containing protein | SHEWBE_RS18485 | Not Available | - | 4061560 - 4061949 | 13750.5 |
| type 3 dihydrofolate reductase | SHEWBE_RS18490 | Not Available | - | 4062051 - 4062533 | 17596.3 |
| threonine/serine exporter family protein | SHEWBE_RS18495 | Not Available | - | 4062566 - 4063036 | 16569.0 |
| threonine/serine exporter thre family protein | SHEWBE_RS18500 | Not Available | - | 4063045 - 4063806 | 27757.5 |
| obg family gtpase cgta | SHEWBE_RS18505 | Not Available | - | 4063868 - 4065031 | 42708.5 |
| 50s ribosomal protein l27 | SHEWBE_RS18510 | Not Available | - | 4065170 - 4065424 | 9083.05 |
| 50s ribosomal protein l21 | SHEWBE_RS18515 | Not Available | - | 4065440 - 4065751 | 11568.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
