Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sulfide/dihydroorotate dehydrogenase-like fad/nad-binding protein | SHEWBE_RS18265 | Not Available | - | 4009284 - 4012022 | 100884.0 |
| 2-oxoacid:acceptor oxidoreductase family protein | SHEWBE_RS18270 | Not Available | - | 4012025 - 4017037 | 183232.0 |
| dna polymerase iii subunit chi | SHEWBE_RS18275 | Not Available | + | 4017948 - 4018412 | 17296.3 |
| valine--trna ligase | SHEWBE_RS18280 | Not Available | + | 4018434 - 4021349 | 110433.0 |
| ammememoradisam system radical sam enzyme | SHEWBE_RS18285 | Not Available | - | 4021502 - 4022653 | 43077.0 |
| methyl-accepting chemotaxis protein | SHEWBE_RS18290 | Not Available | - | 4023021 - 4024754 | 62026.9 |
| tyrosine-type recombinase/integrase | SHEWBE_RS18295 | Not Available | - | 4025051 - 4026162 | 39028.0 |
| ammememoradisam system protein b | SHEWBE_RS18300 | Not Available | + | 4026258 - 4027070 | 29546.4 |
| ammememoradisam system protein a | SHEWBE_RS18305 | Not Available | + | 4027048 - 4027653 | 22242.7 |
| mfs transporter | SHEWBE_RS18310 | Not Available | + | 4027958 - 4029490 | 56161.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
