Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS18215 | Not Available | - | 4000338 - 4000709 | 13926.8 |
| ammonium transporter | SHEWBE_RS18220 | Not Available | - | 4000806 - 4002056 | 43835.6 |
| p-ii family nitrogen regulator | SHEWBE_RS18225 | Not Available | - | 4002070 - 4002408 | 12306.0 |
| lps export abc transporter permease lptg | SHEWBE_RS18230 | Not Available | - | 4002841 - 4003899 | 38809.3 |
| lps export abc transporter permease lptf | SHEWBE_RS18235 | Not Available | - | 4003896 - 4005008 | 41050.9 |
| leucyl aminopeptidase | SHEWBE_RS18240 | Not Available | + | 4005231 - 4006739 | 54799.1 |
| lyse family translocator | SHEWBE_RS18245 | Not Available | + | 4006895 - 4007539 | 22574.0 |
| voc family protein | SHEWBE_RS18250 | Not Available | - | 4007566 - 4007997 | 15750.7 |
| thiol-disulfide oxidoreductase dcc family protein | SHEWBE_RS18255 | Not Available | - | 4008179 - 4008568 | 15064.5 |
| hypothetical protein | SHEWBE_RS18260 | Not Available | + | 4008906 - 4009109 | 7843.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
