Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 311676 - 314606 | Not Available |
| Trna-ala | Not Available | Not Available | + | 315107 - 315182 | Not Available |
| Trna-ile | Not Available | Not Available | + | 315318 - 315394 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 315548 - 317102 | Not Available |
| rna recognition motif domain-containing protein | SHEWBE_RS01550 | Not Available | + | 317879 - 318349 | 17145.6 |
| glutamate racemase | SHEWBE_RS01555 | Not Available | - | 318391 - 319251 | 31258.0 |
| trna (uridine(54)-c5)-methyltransferase trma | SHEWBE_RS01560 | Not Available | + | 319444 - 320541 | 42275.7 |
| hth-type transcriptional repressor fabr | SHEWBE_RS01565 | Not Available | - | 320608 - 321225 | 23029.9 |
| acyl-coa desaturase | SHEWBE_RS01570 | Not Available | + | 321377 - 322483 | 43031.0 |
| selenide, water dikinase seld | SHEWBE_RS01575 | Not Available | + | 322684 - 323724 | 36357.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
