Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SHEWBE_RS18170 | Not Available | - | 3990248 - 3991879 | 60218.8 |
| extracellular solute-binding protein | SHEWBE_RS18175 | Not Available | - | 3992046 - 3993053 | 37640.1 |
| ferredoxin--nadp reductase | SHEWBE_RS18180 | Not Available | - | 3993222 - 3993971 | 27731.7 |
| duf5610 domain-containing protein | SHEWBE_RS18185 | Not Available | - | 3994096 - 3994677 | 21280.7 |
| hypothetical protein | SHEWBE_RS18190 | Not Available | + | 3994985 - 3995188 | 7481.93 |
| hypothetical protein | SHEWBE_RS18195 | Not Available | - | 3995238 - 3995501 | 9822.07 |
| abcb family abc transporter atp-binding protein/permease | SHEWBE_RS18200 | Not Available | - | 3996013 - 3997782 | 65664.2 |
| hypothetical protein | SHEWBE_RS20090 | Not Available | + | 3998198 - 3998374 | 6603.93 |
| 3-deoxy-7-phosphoheptulonate synthase arog | SHEWBE_RS18205 | Not Available | - | 3998533 - 3999588 | 38663.3 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20700 | Not Available | + | 3999821 - 4000165 | 13084.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
