Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | SHEWBE_RS18120 | Not Available | + | 3981374 - 3982033 | 24826.6 |
| energy-coupling factor abc transporter permease | SHEWBE_RS18125 | Not Available | - | 3982214 - 3982900 | 26606.1 |
| vf530 family dna-binding protein | SHEWBE_RS18130 | Not Available | - | 3983025 - 3983528 | 19421.2 |
| putative quinol monooxygenase | SHEWBE_RS18135 | Not Available | - | 3983664 - 3983954 | 11055.2 |
| m13 family metallopeptidase | SHEWBE_RS18140 | Not Available | + | 3984087 - 3986159 | 77405.7 |
| glutathione-dependent disulfide-bond oxidoreductase | SHEWBE_RS18145 | Not Available | + | 3986360 - 3987217 | 32185.9 |
| phospholipase a | SHEWBE_RS18150 | Not Available | - | 3987281 - 3987676 | 15211.9 |
| hypothetical protein | SHEWBE_RS18155 | Not Available | - | 3987639 - 3987827 | 6526.93 |
| dyp-type peroxidase | SHEWBE_RS18160 | Not Available | - | 3988111 - 3989049 | 35258.6 |
| abc transporter atp-binding protein | SHEWBE_RS18165 | Not Available | - | 3989184 - 3990212 | 37893.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
