Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sensor domain-containing diguanylate cyclase | SHEWBE_RS18065 | Not Available | - | 3969907 - 3971136 | 45155.8 |
| hypothetical protein | SHEWBE_RS18070 | Not Available | - | 3971404 - 3971703 | 10656.6 |
| tyrosine-type recombinase/integrase | SHEWBE_RS18080 | Not Available | + | 3972622 - 3973011 | 14517.5 |
| dp-ep family protein | SHEWBE_RS18085 | Not Available | - | 3973174 - 3973569 | 14600.6 |
| winged helix-turn-helix domain-containing protein | SHEWBE_RS18090 | Not Available | - | 3973586 - 3976858 | 122849.0 |
| tyrosine-type recombinase/integrase | SHEWBE_RS18095 | Not Available | - | 3976965 - 3977384 | 15036.0 |
| arsr/smtb family transcription factor | SHEWBE_RS18100 | Not Available | - | 3977554 - 3977880 | 11774.2 |
| peptidylprolyl isomerase | SHEWBE_RS18105 | Not Available | + | 3978121 - 3978399 | 10259.8 |
| alpha/beta hydrolase | SHEWBE_RS18110 | Not Available | - | 3978558 - 3979394 | 30577.9 |
| carbon starvation protein a | SHEWBE_RS18115 | Not Available | - | 3979468 - 3980952 | 53733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
