Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS17965 | Not Available | - | 3949597 - 3949806 | 7787.69 |
| tonb-dependent receptor | SHEWBE_RS17970 | Not Available | - | 3950015 - 3952024 | 72987.8 |
| tyrosine-type recombinase/integrase | SHEWBE_RS17975 | Not Available | - | 3952584 - 3953461 | 30330.6 |
| 4fe-4s dicluster domain-containing protein | SHEWBE_RS17980 | Not Available | - | 3953500 - 3954195 | 25225.2 |
| hypothetical protein | SHEWBE_RS20685 | Not Available | - | 3954210 - 3954560 | 13287.4 |
| lysr family transcriptional regulator | SHEWBE_RS17990 | Not Available | + | 3954936 - 3955559 | 23739.8 |
| hypothetical protein | SHEWBE_RS20690 | Not Available | - | 3955736 - 3955993 | 9726.78 |
| duf805 domain-containing protein | SHEWBE_RS18000 | Not Available | - | 3956577 - 3956735 | 5778.3 |
| azurin | SHEWBE_RS18005 | Not Available | + | 3956949 - 3957437 | 17088.4 |
| tyrosine-type recombinase/integrase | SHEWBE_RS18010 | Not Available | - | 3957499 - 3957732 | 8189.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
