Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS17870 | Not Available | + | 3926845 - 3927048 | 6956.22 |
| tyrosine-type recombinase/integrase | SHEWBE_RS17875 | Not Available | + | 3927084 - 3927263 | 6840.73 |
| serine hydrolase domain-containing protein | SHEWBE_RS17880 | Not Available | + | 3927323 - 3928834 | 55460.4 |
| duf1456 family protein | SHEWBE_RS17885 | Not Available | + | 3928889 - 3929353 | 17822.8 |
| nad-dependent malic enzyme | SHEWBE_RS17890 | Not Available | + | 3929555 - 3931243 | 62425.8 |
| hypothetical protein | SHEWBE_RS20080 | Not Available | + | 3931934 - 3932251 | 11950.5 |
| duf3069 domain-containing protein | SHEWBE_RS17895 | Not Available | - | 3932787 - 3933224 | 16382.3 |
| ggdef domain-containing protein | SHEWBE_RS17900 | Not Available | + | 3933561 - 3935396 | 69454.6 |
| adenosine deaminase | SHEWBE_RS17905 | Not Available | + | 3935695 - 3936690 | 37159.2 |
| hypothetical protein | SHEWBE_RS17910 | Not Available | - | 3936826 - 3937002 | 6146.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
