Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SHEWBE_RS17820 | Not Available | + | 3915414 - 3916030 | 22431.7 |
| duf4097 family beta strand repeat-containing protein | SHEWBE_RS17825 | Not Available | + | 3916448 - 3917056 | 21621.7 |
| 16s rrna pseudouridine(516) synthase rsua | SHEWBE_RS17830 | Not Available | - | 3917185 - 3917910 | 26601.2 |
| sugar o-acetyltransferase | SHEWBE_RS17835 | Not Available | + | 3918004 - 3918549 | 19928.0 |
| m13 family metallopeptidase | SHEWBE_RS17840 | Not Available | + | 3918793 - 3920871 | 77752.9 |
| rela/spot domain-containing protein | SHEWBE_RS17845 | Not Available | + | 3921073 - 3921861 | 29264.8 |
| smi1/knr4 family protein | SHEWBE_RS17850 | Not Available | + | 3922072 - 3922473 | 15419.0 |
| duf4447 family protein | SHEWBE_RS17855 | Not Available | + | 3922601 - 3923110 | 19127.0 |
| glutathione s-transferase family protein | SHEWBE_RS17860 | Not Available | - | 3923232 - 3923855 | 23348.0 |
| tonb-dependent receptor | SHEWBE_RS17865 | Not Available | - | 3923944 - 3926487 | 92770.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
