Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 3901225 - 3901340 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 3901632 - 3904562 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 3905073 - 3906641 | Not Available |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SHEWBE_RS17785 | Not Available | - | 3907490 - 3908311 | 29999.7 |
| duf4124 domain-containing protein | SHEWBE_RS17790 | Not Available | + | 3908448 - 3908894 | 16909.2 |
| atp-dependent chaperone clpb | SHEWBE_RS17795 | Not Available | - | 3909095 - 3911668 | 95465.3 |
| peptidoglycan editing factor pgef | SHEWBE_RS17800 | Not Available | - | 3911789 - 3912508 | 26221.4 |
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | SHEWBE_RS17805 | Not Available | - | 3912526 - 3913500 | 36014.6 |
| outer membrane protein assembly factor bamd | SHEWBE_RS17810 | Not Available | + | 3913624 - 3914388 | 28945.5 |
| Trna-phe | Not Available | Not Available | + | 3914665 - 3914740 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
