Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| septal ring lytic transglycosylase rlpa family protein | SHEWBE_RS17710 | Not Available | + | 3892766 - 3893572 | 29728.4 |
| serine hydrolase | SHEWBE_RS17715 | Not Available | + | 3893729 - 3894901 | 43198.6 |
| duf493 family protein ybed | SHEWBE_RS17720 | Not Available | + | 3895021 - 3895287 | 9645.58 |
| lipoyl(octanoyl) transferase lipb | SHEWBE_RS17725 | Not Available | + | 3895454 - 3896107 | 24132.8 |
| lipoyl synthase | SHEWBE_RS17730 | Not Available | + | 3896104 - 3897069 | 36451.3 |
| ribosomal protein s18-alanine n-acetyltransferase | SHEWBE_RS17735 | Not Available | - | 3897148 - 3897552 | 14959.0 |
| hypothetical protein | SHEWBE_RS17740 | Not Available | - | 3897606 - 3897956 | 12831.8 |
| Trna-trp | Not Available | Not Available | + | 3898234 - 3898310 | Not Available |
| hypothetical protein | SHEWBE_RS20075 | Not Available | - | 3898581 - 3898730 | 5567.48 |
| hypothetical protein | SHEWBE_RS17765 | Not Available | + | 3900310 - 3900576 | 9850.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
