Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminoacyl-trna hydrolase | SHEWBE_RS17610 | Not Available | - | 3870397 - 3870981 | 21108.5 |
| fad-dependent oxidoreductase | SHEWBE_RS17615 | Not Available | - | 3871453 - 3872646 | 43960.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | SHEWBE_RS17625 | Not Available | + | 3873299 - 3874723 | 53595.2 |
| phoh family protein | SHEWBE_RS17630 | Not Available | + | 3874859 - 3875902 | 39337.3 |
| rrna maturation rnase ybey | SHEWBE_RS17635 | Not Available | + | 3875892 - 3876368 | 18055.3 |
| cnnm family magnesium/cobalt transport protein corc | SHEWBE_RS17640 | Not Available | + | 3876419 - 3877294 | 33031.2 |
| apolipoprotein n-acyltransferase | SHEWBE_RS17645 | Not Available | + | 3877345 - 3878889 | 56572.3 |
| methyl-accepting chemotaxis protein | SHEWBE_RS17650 | Not Available | - | 3879041 - 3880909 | 67233.8 |
| eama family transporter | SHEWBE_RS20675 | Not Available | + | 3881367 - 3881636 | 9484.91 |
| hypothetical protein | SHEWBE_RS20680 | Not Available | + | 3881626 - 3881949 | 11516.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
