Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase | SHEWBE_RS17510 | Not Available | - | 3850848 - 3851696 | 30900.4 |
| duf819 domain-containing protein | SHEWBE_RS17515 | Not Available | - | 3852098 - 3853360 | 45251.3 |
| tetratricopeptide repeat protein | SHEWBE_RS17520 | Not Available | - | 3853575 - 3854363 | 29513.7 |
| sirb2 family protein | SHEWBE_RS17525 | Not Available | - | 3854363 - 3854758 | 14701.8 |
| pin domain-containing protein | SHEWBE_RS17530 | Not Available | - | 3855510 - 3859217 | 140244.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | SHEWBE_RS17535 | Not Available | - | 3860638 - 3861480 | 31414.5 |
| peptide chain release factor 1 | SHEWBE_RS17540 | Not Available | - | 3861540 - 3862625 | 40344.7 |
| glutamyl-trna reductase | SHEWBE_RS17545 | Not Available | - | 3862639 - 3863889 | 45785.1 |
| lipoprotein insertase outer membrane protein lolb | SHEWBE_RS17550 | Not Available | + | 3864159 - 3864830 | 25165.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | SHEWBE_RS17555 | Not Available | + | 3864831 - 3865688 | 31622.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
