Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SHEWBE_RS17470 | Not Available | + | 3843838 - 3844164 | 12667.7 |
| ampg family muropeptide mfs transporter | SHEWBE_RS17475 | Not Available | + | 3844310 - 3845743 | 52613.2 |
| hypothetical protein | SHEWBE_RS20070 | Not Available | + | 3845806 - 3845952 | 5292.31 |
| hypothetical protein | SHEWBE_RS20850 | Not Available | + | 3846015 - 3846146 | 4918.87 |
| yajq family cyclic di-gmp-binding protein | SHEWBE_RS17480 | Not Available | - | 3846261 - 3846746 | 18299.9 |
| vanz family protein | SHEWBE_RS17485 | Not Available | + | 3846930 - 3847295 | 14030.5 |
| ketopantoate reductase family protein | SHEWBE_RS17490 | Not Available | + | 3847375 - 3848313 | 33926.2 |
| sodium-dependent transporter | SHEWBE_RS17495 | Not Available | + | 3848438 - 3849928 | 54690.0 |
| methionine/alanine import family nss transporter small subunit | SHEWBE_RS17500 | Not Available | + | 3849925 - 3850035 | 3812.08 |
| phosphatase pap2 family protein | SHEWBE_RS17505 | Not Available | + | 3850161 - 3850835 | 24777.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
