Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | SHEWBE_RS17215 | Not Available | - | 3791546 - 3792877 | 47808.1 |
| dihydropteroate synthase | SHEWBE_RS17220 | Not Available | - | 3793005 - 3793847 | 30822.7 |
| atp-dependent zinc metalloprotease ftsh | SHEWBE_RS17225 | Not Available | - | 3793961 - 3795934 | 72175.1 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | SHEWBE_RS17230 | Not Available | - | 3795980 - 3796609 | 23100.1 |
| ribosome assembly rna-binding protein yhby | SHEWBE_RS17235 | Not Available | + | 3796701 - 3797000 | 10923.6 |
| transcription elongation factor grea | SHEWBE_RS17240 | Not Available | - | 3797191 - 3797667 | 17502.8 |
| carbamoyl-phosphate synthase large subunit | SHEWBE_RS17245 | Not Available | - | 3798160 - 3801378 | 118164.0 |
| glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | SHEWBE_RS17250 | Not Available | - | 3801398 - 3802555 | 41500.7 |
| 4-hydroxy-tetrahydrodipicolinate reductase | SHEWBE_RS17255 | Not Available | - | 3802731 - 3803543 | 29127.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | SHEWBE_RS17260 | Not Available | - | 3803681 - 3804298 | 21950.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
