Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s15 | SHEWBE_RS17165 | Not Available | - | 3782774 - 3783043 | 10377.6 |
| trna pseudouridine(55) synthase trub | SHEWBE_RS17170 | Not Available | - | 3783173 - 3784135 | 35563.8 |
| 30s ribosome-binding factor rbfa | SHEWBE_RS17175 | Not Available | - | 3784135 - 3784557 | 16118.3 |
| translation initiation factor if-2 | SHEWBE_RS17180 | Not Available | - | 3784635 - 3787313 | 96092.3 |
| transcription termination factor nusa | SHEWBE_RS17185 | Not Available | - | 3787340 - 3788839 | 55312.4 |
| ribosome maturation factor rimp | SHEWBE_RS17190 | Not Available | - | 3788868 - 3789323 | 16654.0 |
| Trna-met | Not Available | Not Available | + | 3789485 - 3789561 | Not Available |
| Trna-leu | Not Available | Not Available | + | 3789662 - 3789748 | Not Available |
| preprotein translocase subunit secg | SHEWBE_RS17205 | Not Available | - | 3790230 - 3790565 | 11592.8 |
| triose-phosphate isomerase | SHEWBE_RS17210 | Not Available | - | 3790567 - 3791349 | 28196.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
