Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphopentomutase | SHEWBE_RS17115 | Not Available | - | 3767777 - 3768994 | 43931.9 |
| thymidine phosphorylase | SHEWBE_RS17120 | Not Available | - | 3769016 - 3770347 | 47232.8 |
| deoxyribose-phosphate aldolase | SHEWBE_RS17125 | Not Available | - | 3770534 - 3771307 | 27377.9 |
| outer membrane protein ompk | SHEWBE_RS17130 | Not Available | - | 3771795 - 3772622 | 30592.6 |
| nupc/nupg family nucleoside cnt transporter | SHEWBE_RS17135 | Not Available | - | 3773017 - 3774291 | 43820.9 |
| tatd family hydrolase | SHEWBE_RS17140 | Not Available | - | 3774453 - 3775241 | 29101.6 |
| peptide chain release factor 3 | SHEWBE_RS17145 | Not Available | - | 3775445 - 3777025 | 59255.5 |
| lipoprotein nlpi | SHEWBE_RS17150 | Not Available | - | 3777198 - 3778088 | 33577.8 |
| polyribonucleotide nucleotidyltransferase | SHEWBE_RS17155 | Not Available | - | 3778329 - 3780437 | 75716.9 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | SHEWBE_RS17160 | Not Available | + | 3780633 - 3782666 | 75959.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
