Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS17065 | Not Available | - | 3756681 - 3757184 | 19039.8 |
| metallophosphoesterase | SHEWBE_RS17070 | Not Available | - | 3757233 - 3757844 | 23188.6 |
| hypothetical protein | SHEWBE_RS17075 | Not Available | - | 3757900 - 3758271 | 14184.0 |
| hypothetical protein | SHEWBE_RS20845 | Not Available | + | 3759060 - 3759194 | 4869.95 |
| dna repair protein rada | SHEWBE_RS17085 | Not Available | - | 3759670 - 3761043 | 49856.0 |
| pilz domain-containing protein | SHEWBE_RS17090 | Not Available | + | 3761298 - 3763712 | 92227.0 |
| alpha/beta fold hydrolase | SHEWBE_RS17095 | Not Available | - | 3763744 - 3764673 | 34891.9 |
| phosphoserine phosphatase serb | SHEWBE_RS17100 | Not Available | - | 3764885 - 3765865 | 35552.2 |
| ytjb family periplasmic protein | SHEWBE_RS17105 | Not Available | + | 3765944 - 3766609 | 25173.0 |
| purine-nucleoside phosphorylase | SHEWBE_RS17110 | Not Available | - | 3766928 - 3767638 | 25402.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
