Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS17010 | Not Available | - | 3749656 - 3750063 | 14799.8 |
| hypothetical protein | SHEWBE_RS17015 | Not Available | - | 3750083 - 3750439 | 12665.1 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20650 | Not Available | - | 3750982 - 3751838 | 31312.8 |
| hypothetical protein | SHEWBE_RS20655 | Not Available | + | 3752187 - 3752429 | 9384.2 |
| is30 family transposase | SHEWBE_RS20660 | Not Available | + | 3752413 - 3752982 | 21334.6 |
| dj-1/pfpi family protein | SHEWBE_RS17035 | Not Available | - | 3753052 - 3753783 | 27006.3 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20665 | Not Available | + | 3754199 - 3754279 | 3247.97 |
| tyrosine-type recombinase/integrase | SHEWBE_RS17045 | Not Available | + | 3754377 - 3754754 | 14512.4 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20670 | Not Available | - | 3754987 - 3755826 | 31469.0 |
| tyrosine-type recombinase/integrase | SHEWBE_RS17060 | Not Available | - | 3756080 - 3756367 | 10833.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
