Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | SHEWBE_RS16860 | Not Available | - | 3709968 - 3710444 | 16659.1 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | SHEWBE_RS16865 | Not Available | - | 3710568 - 3711671 | 40561.9 |
| riboflavin synthase | SHEWBE_RS16870 | Not Available | - | 3711778 - 3712440 | 23946.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | SHEWBE_RS16875 | Not Available | - | 3712444 - 3713586 | 40944.2 |
| transcriptional regulator nrdr | SHEWBE_RS16880 | Not Available | - | 3713644 - 3714093 | 16876.4 |
| serine hydroxymethyltransferase | SHEWBE_RS16885 | Not Available | - | 3714210 - 3715466 | 45440.2 |
| energy-dependent translational throttle protein etta | SHEWBE_RS16890 | Not Available | + | 3716318 - 3717985 | 62112.1 |
| metallophosphoesterase | SHEWBE_RS16895 | Not Available | + | 3718443 - 3719498 | 39879.3 |
| m43 family zinc metalloprotease | SHEWBE_RS16900 | Not Available | - | 3720548 - 3722311 | 63529.5 |
| hypothetical protein | SHEWBE_RS16905 | Not Available | - | 3722875 - 3723699 | 30895.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
