Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtp diphosphokinase | SHEWBE_RS16810 | Not Available | - | 3697486 - 3699690 | 83228.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | SHEWBE_RS16815 | Not Available | - | 3699833 - 3701188 | 49758.4 |
| two-component sensor histidine kinase bara | SHEWBE_RS16820 | Not Available | + | 3701286 - 3704099 | 105083.0 |
| yjag family protein | SHEWBE_RS16825 | Not Available | + | 3704074 - 3704679 | 22653.2 |
| aec family transporter | SHEWBE_RS16830 | Not Available | + | 3704852 - 3705850 | 35591.8 |
| dna repair protein recn | SHEWBE_RS16835 | Not Available | + | 3705988 - 3707649 | 60665.4 |
| hypothetical protein | SHEWBE_RS16840 | Not Available | + | 3707668 - 3707994 | 12198.8 |
| phosphatidylglycerophosphatase a | SHEWBE_RS16845 | Not Available | - | 3707991 - 3708485 | 17859.5 |
| thiamine-phosphate kinase | SHEWBE_RS16850 | Not Available | - | 3708485 - 3709444 | 34685.0 |
| transcription antitermination factor nusb | SHEWBE_RS16855 | Not Available | - | 3709549 - 3709953 | 15305.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
