Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | SHEWBE_RS16760 | Not Available | - | 3688305 - 3689234 | 34000.3 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | SHEWBE_RS16765 | Not Available | - | 3689355 - 3689990 | 22868.9 |
| 5'/3'-nucleotidase sure | SHEWBE_RS16770 | Not Available | - | 3689987 - 3690736 | 26390.5 |
| trna pseudouridine(13) synthase trud | SHEWBE_RS16775 | Not Available | - | 3690815 - 3691888 | 40626.3 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SHEWBE_RS16780 | Not Available | - | 3691936 - 3692421 | 17315.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SHEWBE_RS16785 | Not Available | - | 3692516 - 3693217 | 25569.0 |
| cell division protein ftsb | SHEWBE_RS16790 | Not Available | - | 3693254 - 3693544 | 10855.2 |
| phosphopyruvate hydratase | SHEWBE_RS16795 | Not Available | - | 3693700 - 3694992 | 45983.7 |
| ctp synthase | SHEWBE_RS16800 | Not Available | - | 3695123 - 3696760 | 60085.0 |
| tyrosine-type recombinase/integrase | SHEWBE_RS16805 | Not Available | - | 3696875 - 3697372 | 18867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
