Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SHEWBE_RS16655 | Not Available | + | 3672053 - 3672238 | 6864.84 |
| pbpra1643 family swim/sec-c metal-binding motif protein | SHEWBE_RS16660 | Not Available | + | 3672410 - 3672745 | 12384.9 |
| hypothetical protein | SHEWBE_RS16665 | Not Available | - | 3672865 - 3673059 | 7238.69 |
| pilz domain-containing protein | SHEWBE_RS16670 | Not Available | - | 3673235 - 3673834 | 22491.1 |
| sodium ion-translocating decarboxylase subunit beta | SHEWBE_RS16675 | Not Available | - | 3673973 - 3675103 | 38944.3 |
| sodium-extruding oxaloacetate decarboxylase subunit alpha | SHEWBE_RS16680 | Not Available | - | 3675112 - 3676914 | 65600.7 |
| oadg family protein | SHEWBE_RS16685 | Not Available | - | 3676936 - 3677181 | 9006.43 |
| Trna-ser | Not Available | Not Available | + | 3677680 - 3677771 | Not Available |
| Trna-arg | Not Available | Not Available | + | 3677794 - 3677870 | Not Available |
| Trna-arg | Not Available | Not Available | + | 3677951 - 3678027 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
