Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | SHEWBE_RS16440 | Not Available | + | 3631710 - 3633947 | 81508.3 |
| sensor domain-containing diguanylate cyclase | SHEWBE_RS16445 | Not Available | - | 3634011 - 3635003 | 37651.1 |
| beta-propeller fold lactonase family protein | SHEWBE_RS16450 | Not Available | + | 3635246 - 3636589 | 47098.4 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20935 | Not Available | + | 3636928 - 3637014 | 2953.47 |
| tyrosine-type recombinase/integrase | SHEWBE_RS16470 | Not Available | + | 3637070 - 3637742 | 23390.4 |
| hypothetical protein | SHEWBE_RS16475 | Not Available | + | 3638184 - 3638588 | 14682.8 |
| duf2496 domain-containing protein | SHEWBE_RS16480 | Not Available | - | 3638608 - 3638820 | 7484.0 |
| hypothetical protein | SHEWBE_RS16485 | Not Available | + | 3638973 - 3639224 | 9239.35 |
| ggdef domain-containing protein | SHEWBE_RS16495 | Not Available | + | 3639642 - 3639845 | 7503.74 |
| dicarboxylate/amino acid:cation symporter | SHEWBE_RS16500 | Not Available | - | 3639851 - 3641140 | 45720.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
