Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna (guanosine(18)-2'-o)-methyltransferase trmh | SHEWBE_RS00970 | Not Available | + | 205318 - 206013 | 25820.0 |
| tyrosine-type recombinase/integrase | SHEWBE_RS20235 | Not Available | + | 206517 - 206672 | 5411.75 |
| hypothetical protein | SHEWBE_RS00975 | Not Available | - | 206965 - 207990 | 38854.2 |
| hypothetical protein | SHEWBE_RS00985 | Not Available | - | 208255 - 208632 | 14159.1 |
| amp-binding protein | SHEWBE_RS00990 | Not Available | + | 209416 - 211074 | 61185.6 |
| calcium/sodium antiporter | SHEWBE_RS00995 | Not Available | + | 211253 - 212185 | 32267.6 |
| atp-dependent dna helicase recg | SHEWBE_RS01000 | Not Available | + | 212737 - 214812 | 76554.4 |
| duf3014 domain-containing protein | SHEWBE_RS01005 | Not Available | + | 214876 - 215733 | 31740.2 |
| beta-ketoacyl synthase chain length factor | SHEWBE_RS01010 | Not Available | + | 215960 - 216676 | 26608.2 |
| lysophospholipid acyltransferase family protein | SHEWBE_RS01015 | Not Available | + | 216669 - 217475 | 29653.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
