Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | SHEWBE_RS05465 | Not Available | - | 1184823 - 1185392 | 21643.9 |
| flavocytochrome c | SHEWBE_RS05470 | Not Available | + | 1185956 - 1187746 | 63242.1 |
| class 1 fructose-bisphosphatase | SHEWBE_RS05475 | Not Available | - | 1187993 - 1188982 | 36116.8 |
| s9 family peptidase | SHEWBE_RS05480 | Not Available | + | 1189236 - 1191503 | 85742.1 |
| two-component system response regulator arca | SHEWBE_RS05485 | Not Available | - | 1191812 - 1192531 | 27202.6 |
| duf3293 domain-containing protein | SHEWBE_RS05490 | Not Available | + | 1193105 - 1193548 | 17046.3 |
| lysine-sensitive aspartokinase 3 | SHEWBE_RS05495 | Not Available | + | 1193976 - 1195325 | 48488.4 |
| succinylglutamate desuccinylase/aspartoacylase family protein | SHEWBE_RS05500 | Not Available | + | 1195383 - 1196489 | 40829.0 |
| s8 family serine peptidase | SHEWBE_RS05505 | Not Available | - | 1196565 - 1200434 | 134648.0 |
| transcriptional regulator asnc | SHEWBE_RS05510 | Not Available | - | 1200660 - 1201121 | 17008.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
