Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heme abc transporter atp-binding protein/permease cydc | SHEWBE_RS05215 | Not Available | + | 1119751 - 1121544 | 65778.0 |
| bifunctional proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase puta | SHEWBE_RS05220 | Not Available | - | 1121648 - 1124842 | 116048.0 |
| tigr04211 family sh3 domain-containing protein | SHEWBE_RS05225 | Not Available | - | 1125206 - 1125781 | 21390.7 |
| inorganic phosphate transporter | SHEWBE_RS05230 | Not Available | - | 1126034 - 1127302 | 43519.1 |
| tigr00153 family protein | SHEWBE_RS05235 | Not Available | - | 1127327 - 1128007 | 25497.4 |
| inorganic triphosphatase | SHEWBE_RS05240 | Not Available | + | 1128294 - 1129808 | 56720.1 |
| ion transporter | SHEWBE_RS05245 | Not Available | - | 1129865 - 1130671 | 30579.1 |
| hypothetical protein | SHEWBE_RS05250 | Not Available | - | 1130745 - 1131074 | 12442.0 |
| hypothetical protein | SHEWBE_RS05255 | Not Available | - | 1131168 - 1131821 | 25201.4 |
| pspa/im30 family protein | SHEWBE_RS05260 | Not Available | - | 1132016 - 1132702 | 25499.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
