Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SHEWBE_RS05170 | Not Available | + | 1108386 - 1109097 | 25633.5 |
| methyl-accepting chemotaxis protein | SHEWBE_RS05175 | Not Available | - | 1109492 - 1111414 | 69643.0 |
| hypothetical protein | SHEWBE_RS05180 | Not Available | - | 1111525 - 1111836 | 12165.3 |
| hypothetical protein | SHEWBE_RS20390 | Not Available | + | 1112466 - 1112621 | 5256.75 |
| atp-dependent rna helicase dbpa | SHEWBE_RS05190 | Not Available | + | 1112894 - 1114270 | 50949.0 |
| hypothetical protein | SHEWBE_RS19965 | Not Available | - | 1114373 - 1114528 | 6211.13 |
| dead/deah box helicase | SHEWBE_RS05195 | Not Available | - | 1114960 - 1116399 | 51534.5 |
| duf3565 domain-containing protein | SHEWBE_RS05200 | Not Available | + | 1116952 - 1117161 | 7891.46 |
| duf3622 domain-containing protein | SHEWBE_RS05205 | Not Available | + | 1117241 - 1117600 | 13629.7 |
| heme abc transporter permease/atp-binding protein cydd | SHEWBE_RS05210 | Not Available | + | 1117949 - 1119754 | 66379.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
