Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is4 family transposase | SHEWBE_RS05115 | Not Available | - | 1092927 - 1094195 | 48433.9 |
| tigr02444 family protein | SHEWBE_RS05120 | Not Available | - | 1094430 - 1094873 | 17365.7 |
| abc transporter atp-binding protein | SHEWBE_RS05125 | Not Available | - | 1094963 - 1096873 | 71524.6 |
| yhev family putative zinc ribbon protein | SHEWBE_RS05130 | Not Available | + | 1097054 - 1097254 | 7304.92 |
| 16s ribosomal rna | Not Available | Not Available | + | 1098686 - 1100254 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 1100765 - 1103695 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | + | 1103901 - 1104016 | Not Available |
| is630 family transposase | SHEWBE_RS05155 | Not Available | - | 1104382 - 1105417 | 39552.1 |
| is630 family transposase | SHEWBE_RS05160 | Not Available | - | 1105753 - 1106788 | 39552.1 |
| is630 family transposase | SHEWBE_RS05165 | Not Available | - | 1106867 - 1107902 | 39552.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
