Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair endonuclease mutl | SHEWBE_RS04970 | Not Available | + | 1061812 - 1063662 | 68112.1 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | SHEWBE_RS04975 | Not Available | + | 1063712 - 1064638 | 34668.1 |
| rna chaperone hfq | SHEWBE_RS04980 | Not Available | + | 1064733 - 1065011 | 10121.1 |
| ribosome rescue gtpase hflx | SHEWBE_RS04985 | Not Available | + | 1065031 - 1066329 | 48624.1 |
| ftsh protease activity modulator hflk | SHEWBE_RS04990 | Not Available | + | 1066370 - 1067512 | 42181.9 |
| protease modulator hflc | SHEWBE_RS04995 | Not Available | + | 1067515 - 1068393 | 32473.2 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | SHEWBE_RS05000 | Not Available | + | 1068719 - 1069309 | 20821.9 |
| cytochrome b | SHEWBE_RS05005 | Not Available | + | 1069309 - 1070523 | 46258.1 |
| cytochrome c1 | SHEWBE_RS05010 | Not Available | + | 1070523 - 1071245 | 27096.3 |
| stringent starvation protein sspa | SHEWBE_RS05015 | Not Available | + | 1071353 - 1071982 | 24076.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
