Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Alteromonadales
Family
Shewanellaceae
Genus
Shewanella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Alteromonadales |
| Family | Shewanellaceae |
| Genus | Shewanella |
| Species | Shewanella benthica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | deep-sea; deepsea; Mariana Trench's Challenger Deep; Tonga-Kermadec subduction zone |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shewanella benthica
Accession NumberNZ_LS483452.1
Gene Summary
Adenine Count
1175565 bp
Thymine Count
1181310 bp
Guanine Count
994413 bp
Cytosine Count
1002217 bp
Genome Length
4353505 bp
Protein-coding Genes
3730 genes
Non-Coding Genes
174 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | SHEWBE_RS04810 | Not Available | - | 1031208 - 1032278 | 41276.3 |
| trna dihydrouridine(20/20a) synthase dusa | SHEWBE_RS04815 | Not Available | + | 1032387 - 1033397 | 37624.2 |
| hypothetical protein | SHEWBE_RS04820 | Not Available | + | 1033690 - 1033989 | 10695.0 |
| enoyl-coa hydratase-related protein | SHEWBE_RS04825 | Not Available | - | 1034157 - 1034894 | 27061.8 |
| copper chaperone pcu(a)c | SHEWBE_RS04830 | Not Available | + | 1034927 - 1035403 | 17360.3 |
| duf2333 family protein | SHEWBE_RS04835 | Not Available | + | 1035434 - 1036405 | 36163.3 |
| tigr04219 family outer membrane beta-barrel protein | SHEWBE_RS04840 | Not Available | + | 1036413 - 1037177 | 27489.1 |
| outer membrane channel protein tolc | SHEWBE_RS04845 | Not Available | - | 1037290 - 1038636 | 49356.8 |
| adp-ribose diphosphatase | SHEWBE_RS04850 | Not Available | + | 1038969 - 1039574 | 22675.9 |
| duf1249 domain-containing protein | SHEWBE_RS04855 | Not Available | + | 1039731 - 1040177 | 17180.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
