Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Aquipseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Aquipseudomonas |
| Species | Aquipseudomonas alcaligenes |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil contaminated soil; forest soil; mangrove soil; soil; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas alcaligenes
Accession NumberQJRX00000000.1
Gene Summary
Adenine Count
668748 bp
Thymine Count
675444 bp
Guanine Count
1344043 bp
Cytosine Count
1324170 bp
Genome Length
4012525 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine endopeptidase | DMO17_01645 | Not Available | - | 356524 - 357375 | 30970.7 |
| hypothetical protein | DMO17_01650 | Not Available | - | 357498 - 358364 | 31873.1 |
| shikimate dehydrogenase | DMO17_01655 | Not Available | - | 358366 - 359184 | 29078.7 |
| oxygen-dependent coproporphyrinogen oxidase | DMO17_01660 | Not Available | - | 359311 - 360225 | 34366.3 |
| quinone oxidoreductase | DMO17_01665 | Not Available | + | 360343 - 361320 | 34377.2 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | DMO17_01670 | Not Available | - | 361327 - 361884 | 20552.7 |
| dna-protecting protein dpra | DMO17_01675 | Not Available | - | 361924 - 363012 | 38036.8 |
| peptidoglycan-binding protein | DMO17_01680 | Not Available | - | 363076 - 364116 | 37978.3 |
| peptide deformylase | DMO17_01685 | Not Available | + | 364250 - 364756 | 19204.2 |
| methionyl-trna formyltransferase | DMO17_01690 | Not Available | + | 364818 - 365750 | 32724.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.