Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Aquipseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Aquipseudomonas |
| Species | Aquipseudomonas alcaligenes |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | crude oil contaminated soil; forest soil; mangrove soil; soil; Sundarbans mangrove |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas alcaligenes
Accession NumberQJRX00000000.1
Gene Summary
Adenine Count
668748 bp
Thymine Count
675444 bp
Guanine Count
1344043 bp
Cytosine Count
1324170 bp
Genome Length
4012525 bp
Protein-coding Genes
3774 genes
Non-Coding Genes
100 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | DMO17_00250 | Not Available | + | 52064 - 53908 | 68962.1 |
| bifunctional diguanylate cyclase/phosphodiesterase | DMO17_00255 | Not Available | + | 53993 - 57724 | 139509.0 |
| Trna-met | Not Available | Not Available | + | 57742 - 57818 | Not Available |
| diguanylate cyclase | DMO17_00265 | Not Available | - | 57912 - 59216 | 48395.2 |
| mbl fold metallo-hydrolase | DMO17_00270 | Not Available | - | 59294 - 61084 | 66189.8 |
| lysr family transcriptional regulator | DMO17_00275 | Not Available | + | 61184 - 62098 | 33105.0 |
| peroxiredoxin | DMO17_00280 | Not Available | - | 62157 - 62624 | 17273.2 |
| amino acid abc transporter substrate-binding protein | DMO17_00285 | Not Available | - | 62696 - 63406 | 26474.2 |
| abc transporter substrate-binding protein | DMO17_00290 | Not Available | - | 63393 - 65072 | 61896.0 |
| nitronate monooxygenase | DMO17_00295 | Not Available | - | 65125 - 66183 | 35971.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.