Dorea formicigenerans

Gram-positiveAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Dorea

Description

Dorea formicigenerans is a Gram-positive, rod-shaped microbe that thrives in mesophilic temperatures, categorizing it as a chemoheterotroph, and can be found in various body sites of humans and animals, including the gastrointestinal tract, skin, and respiratory system. As an obligate anaerobe, Dorea formicigenerans requires the absence of oxygen to grow and survive, which is reflected in its optimal growth conditions. The Gram-positive characteristic of Dorea formicigenerans indicates that it has a thick peptidoglycan layer in its cell wall, providing it with a robust structure. Its rod shape allows it to maintain a large surface area, facilitating the exchange of nutrients and waste products. As a chemoheterotroph, Dorea formicigenerans relies on organic compounds for energy and carbon, which it obtains from its surroundings. This microbe can be found in a wide range of body sites, from the oral cavity to the gut, and even in the environment, such as in soil and water. The inability of Dorea formicigenerans to survive in the presence of oxygen makes it well adapted to environments with low oxygen levels, such as the human gut. Dorea formicigenerans plays a significant role in the fermentation of complex carbohydrates and production of short-chain fatty acids, which are essential for maintaining a healthy gut microbiome, and its unique metabolic capabilities allow it to contribute to the degradation of various organic compounds, making it a key player in the ecosystem.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusDorea
SpeciesDorea formicigenerans
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dorea formicigenerans

Accession NumberQSQQ00000000.1

Gene Summary

Adenine Count

963281 bp

Thymine Count

1068331 bp

Guanine Count

623615 bp

Cytosine Count

769818 bp

Genome Length

3425215 bp

Protein-coding Genes

3133 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
prephenate dehydrogenase/arogenate dehydrogenase family proteinDXD10_04180Not Available+870044 - 87113840472.5
3-phosphoshikimate 1-carboxyvinyltransferaseDXD10_04185Not Available+871128 - 87242645512.0
dna-binding response regulatorDXD10_04190Not Available-872499 - 87324528453.0
sensor histidine kinaseDXD10_04195Not Available-873242 - 87499366129.1
dicarboxylate/amino acid:cation symporterDXD10_04200Not Available-875285 - 87655345001.5
ketopantoate reductase family proteinDXD10_04205Not Available-876765 - 87768233913.1
precorrin-8x methylmutaseDXD10_04210Not Available-877920 - 87855523145.0
cobyric acid synthaseDXD10_04215Not Available-878555 - 88008155875.4
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDXD10_04220Not Available-880063 - 88110940177.4
cobalamin biosynthesis protein cobdDXD10_04225Not Available-881197 - 88217135834.1

Displaying genes 871 – 880 of 11879 in total

Pathways

1379 pathways

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites