Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family substrate-binding domain-containing protein | DQO56_RS04055 | Not Available | + | 890138 - 890917 | 28396.6 |
| hydrogen peroxide-inducible genes activator | DQO56_RS04060 | Not Available | - | 890919 - 891848 | 32221.2 |
| peroxiredoxin | DQO56_RS04065 | Not Available | + | 892024 - 892614 | 21679.5 |
| carboxymuconolactone decarboxylase family protein | DQO56_RS04070 | Not Available | + | 892611 - 893144 | 18772.4 |
| hypothetical protein | DQO56_RS04075 | Not Available | - | 893217 - 893936 | 26161.2 |
| hypothetical protein | DQO56_RS04080 | Not Available | + | 893986 - 894249 | 9771.96 |
| aspartate aminotransferase family protein | DQO56_RS04085 | Not Available | - | 894255 - 895517 | 44222.3 |
| atp-dependent rna helicase hrpa | DQO56_RS04090 | Not Available | + | 895650 - 899543 | 144505.0 |
| transcriptional regulator nrdr | DQO56_RS04095 | Not Available | - | 899570 - 900040 | 17539.6 |
| lysm peptidoglycan-binding domain-containing protein | DQO56_RS04100 | Not Available | - | 900238 - 900534 | 9754.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
