Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiolase family protein | DQO56_RS03855 | Not Available | + | 844128 - 845348 | 42621.8 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | DQO56_RS03860 | Not Available | + | 845351 - 847492 | 75035.9 |
| sugar porter family mfs transporter | DQO56_RS03865 | Not Available | + | 847676 - 849073 | 49683.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DQO56_RS03870 | Not Available | - | 849095 - 851059 | 69241.5 |
| mdr family mfs transporter | DQO56_RS03875 | Not Available | - | 851216 - 852823 | 55150.3 |
| marr family winged helix-turn-helix transcriptional regulator | DQO56_RS03880 | Not Available | - | 852820 - 853284 | 16832.2 |
| class i sam-dependent rna methyltransferase | DQO56_RS03885 | Not Available | - | 853414 - 854706 | 45795.0 |
| apc family permease | DQO56_RS03890 | Not Available | - | 854703 - 856700 | 72259.3 |
| potassium channel family protein | DQO56_RS03895 | Not Available | + | 856895 - 857560 | 23486.8 |
| potassium channel family protein | DQO56_RS03900 | Not Available | + | 857595 - 858248 | 23377.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
