Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | DQO56_RS03315 | Not Available | - | 732464 - 733573 | 38883.6 |
| shikimate kinase | DQO56_RS03320 | Not Available | - | 733570 - 734130 | 20212.1 |
| chorismate synthase | DQO56_RS03325 | Not Available | - | 734135 - 735322 | 41237.3 |
| prepilin peptidase | DQO56_RS03330 | Not Available | - | 735371 - 735973 | 19156.0 |
| duf1622 domain-containing protein | DQO56_RS03335 | Not Available | + | 736147 - 736506 | 12822.6 |
| xylan 1,4-beta-xylosidase | DQO56_RS03340 | Not Available | - | 736563 - 737888 | 48701.2 |
| hypothetical protein | DQO56_RS21690 | Not Available | - | 737943 - 738077 | 4770.08 |
| hypothetical protein | DQO56_RS03345 | Not Available | - | 738146 - 739006 | 32474.3 |
| kama family radical sam protein | DQO56_RS03350 | Not Available | - | 739003 - 740442 | 54311.7 |
| flavin monoamine oxidase family protein | DQO56_RS03355 | Not Available | - | 740439 - 741827 | 49039.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
