Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | DQO56_RS02865 | Not Available | + | 637314 - 637880 | 21295.4 |
| helix-turn-helix domain-containing protein | DQO56_RS21450 | Not Available | - | 637895 - 638146 | 9327.97 |
| abc-f family atp-binding cassette domain-containing protein | DQO56_RS02875 | Not Available | - | 638222 - 639853 | 58519.8 |
| lycopene cyclase family protein | DQO56_RS02880 | Not Available | + | 640025 - 641143 | 39766.6 |
| ku protein | DQO56_RS02885 | Not Available | + | 641216 - 642220 | 36333.8 |
| mdr family mfs transporter | DQO56_RS02890 | Not Available | - | 642243 - 643874 | 55836.7 |
| marr family winged helix-turn-helix transcriptional regulator | DQO56_RS02895 | Not Available | - | 644040 - 644537 | 18504.1 |
| metal-sulfur cluster assembly factor | DQO56_RS02900 | Not Available | - | 644553 - 644981 | 15140.8 |
| fe-s cluster assembly sulfur transfer protein sufu | DQO56_RS02905 | Not Available | - | 644978 - 645481 | 17539.5 |
| cysteine desulfurase | DQO56_RS02910 | Not Available | - | 645481 - 646737 | 44805.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
