Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biotin/lipoate a/b protein ligase family protein | DQO56_RS02460 | Not Available | + | 559432 - 560481 | 38126.1 |
| glycoside hydrolase family 19 protein | DQO56_RS02470 | Not Available | + | 561640 - 562485 | 29648.3 |
| vit family protein | DQO56_RS02475 | Not Available | - | 562637 - 563380 | 25198.4 |
| site-specific integrase | DQO56_RS02480 | Not Available | + | 563460 - 563663 | 7249.47 |
| alpha/beta fold hydrolase | DQO56_RS02485 | Not Available | - | 563679 - 564569 | 32953.6 |
| mfs transporter | DQO56_RS02490 | Not Available | - | 564698 - 566260 | 53106.3 |
| tetr/acrr family transcriptional regulator | DQO56_RS02495 | Not Available | + | 566347 - 566889 | 19228.9 |
| metallophosphoesterase family protein | DQO56_RS02500 | Not Available | - | 566907 - 567413 | 18593.2 |
| cysteine--1-d-myo-inosityl 2-amino-2-deoxy-alpha-d-glucopyranoside ligase | DQO56_RS02505 | Not Available | - | 567457 - 568698 | 45381.1 |
| sco1664 family protein | DQO56_RS02510 | Not Available | - | 568759 - 569565 | 29608.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
