Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DQO56_RS00200 | Not Available | + | 42166 - 43176 | 36459.2 |
| hypothetical protein | DQO56_RS00205 | Not Available | + | 43180 - 43974 | 27120.1 |
| peptidoglycan d,d-transpeptidase ftsi family protein | DQO56_RS00210 | Not Available | + | 44049 - 45875 | 64370.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DQO56_RS00215 | Not Available | + | 45996 - 47657 | 56885.7 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DQO56_RS00220 | Not Available | + | 47654 - 49183 | 52002.7 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DQO56_RS00225 | Not Available | + | 49180 - 50259 | 37977.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DQO56_RS00230 | Not Available | + | 50264 - 51760 | 51852.8 |
| putative lipid ii flippase ftsw | DQO56_RS00235 | Not Available | + | 51826 - 53259 | 50812.7 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | DQO56_RS00240 | Not Available | + | 53256 - 54410 | 39859.2 |
| udp-n-acetylmuramate--l-alanine ligase | DQO56_RS00245 | Not Available | + | 54407 - 55936 | 53627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
