Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | DQO56_RS02305 | Not Available | - | 517529 - 518695 | 42218.9 |
| ycii family protein | DQO56_RS02310 | Not Available | - | 518703 - 519110 | 14759.3 |
| dmt family transporter | DQO56_RS02315 | Not Available | - | 519155 - 520144 | 33998.8 |
| plp-dependent aminotransferase family protein | DQO56_RS02320 | Not Available | + | 520143 - 521549 | 49519.8 |
| tyrosine-type recombinase/integrase | DQO56_RS02325 | Not Available | - | 521577 - 522737 | 41950.7 |
| aminopeptidase n | DQO56_RS02330 | Not Available | - | 522734 - 525220 | 91061.8 |
| abc transporter atp-binding protein | DQO56_RS02335 | Not Available | - | 525297 - 527213 | 69417.6 |
| abc transporter atp-binding protein | DQO56_RS02340 | Not Available | - | 527249 - 528982 | 62151.1 |
| rifampin monooxygenase | DQO56_RS02345 | Not Available | + | 529338 - 530765 | 51304.7 |
| dj-1/pfpi family protein | DQO56_RS02350 | Not Available | + | 530819 - 531427 | 21519.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
