Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Rhodococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Rhodococcus |
| Species | Rhodococcus coprophilus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | crude-oil-contaminated soils; deionized water; Fresh water; normal sewage; sterilized sewage; wastewater |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodococcus coprophilus
Accession NumberNZ_LS483468.1
Gene Summary
Adenine Count
757838 bp
Thymine Count
761233 bp
Guanine Count
1533829 bp
Cytosine Count
1526934 bp
Genome Length
4579834 bp
Protein-coding Genes
4181 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ppox class f420-dependent oxidoreductase | DQO56_RS02105 | Not Available | + | 470486 - 470881 | 14156.6 |
| m24 family metallopeptidase | DQO56_RS02110 | Not Available | - | 470933 - 472063 | 39298.9 |
| 5'-3' exonuclease | DQO56_RS02115 | Not Available | + | 472099 - 473082 | 34050.8 |
| duf4333 domain-containing protein | DQO56_RS02120 | Not Available | - | 473120 - 473914 | 26911.8 |
| dead/deah box helicase | DQO56_RS02125 | Not Available | - | 474044 - 476761 | 99223.4 |
| twin-arginine translocase subunit tatc | DQO56_RS02130 | Not Available | - | 476797 - 477726 | 33920.8 |
| sec-independent protein translocase subunit tata | DQO56_RS02135 | Not Available | - | 477835 - 478104 | 9725.72 |
| helix-turn-helix transcriptional regulator | DQO56_RS02140 | Not Available | - | 478227 - 479204 | 34823.4 |
| helix-turn-helix transcriptional regulator | DQO56_RS02145 | Not Available | - | 479201 - 480202 | 36391.2 |
| pup--protein ligase | DQO56_RS02150 | Not Available | - | 480272 - 481630 | 50978.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
